miRBase entry: cja-mir-514b

Stem-loop cja-mir-514b

Accession

MI0032209

Description

Callithrix jacchus cja-mir-514b precursor miRNA

Sequence

uccuugaauguucuauucuucgugugguacucUACUCAAGAGGGGGCAAUCAUGuguaauuaguuaugauugacaccucugugaguggaguaacacaugauauauacaucaaagga
(((((..((((..(((...(((((((.((((((((((((((((...((((((((..........))))))))...))))).))))))))))).))))))).))).))))..)))))

Structure

     ga    uc   ucu       g           -     GGG        ugua 
uccuu  augu  uau   ucgugug uacucUACUCA AGAGG   CAAUCAUG    a
|||||  ||||  |||   ||||||| ||||||||||| |||||   ||||||||     
aggaa  uaca  aua   aguacac augaggugagu ucucc   guuaguau    u
     ac    -u   --u       a           g     aca        ugau

Annotation confidence Not enough data

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Genome context

chrX: 134449876-134449991 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-514b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-514b

Accession	MIMAT0039668
Description	Callithrix jacchus cja-miR-514b mature miRNA
Sequence	33 - UACUCAAGAGGGGGCAAUCAUG - 54
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857