Stem-loop cja-mir-506

Accession

MI0032210

Description

Callithrix jacchus cja-mir-506 precursor miRNA

Sequence

gccaccagcaucagccaugcucugcauagugccuuguucaggaagguguuuuucauacagaugaauguuUGAAUGGCACCCUUCUGAGCAGAguaaugugcaacauggacgacauuugugguggc
(((((((.((((..(((((...((((((.(((.((((((((((.((((((.((((.(((......))).)))).)))))).)))))))))).))).)))))).)))))..))....)))))))))

Structure

       g  ----  ag     cuc      g   c          a      u    u   ga 
gccacca ca    uc  ccaug   ugcaua ugc uuguucagga gguguu uuca aca  u
||||||| ||    ||  |||||   |||||| ||| |||||||||| |||||| |||| |||   
cgguggu gu    ag  gguac   acgugu aug GACGAGUCUU CCACGG AAGU ugu  g
       -  uuac  ca     --a      a   A          C      U    u   aa 

Annotation confidence Not enough data

Genome context

chrX: 134435733-134435857 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-506

Mature cja-miR-506

• Accession: MIMAT0039669
• Description: Callithrix jacchus cja-miR-506 mature miRNA
• Sequence: 70 - UGAAUGGCACCCUUCUGAGCAGA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857