Stem-loop cja-mir-513f-1

Accession

MI0032211

Description

Callithrix jacchus cja-mir-513f-1 precursor miRNA

Sequence

gugcagugcccuuacaagaaggugccauucaugugaacuaauauaUGAAUGUCGCCUUCUUGAGAAGAguaauguac
(((((.(((.(((.((((((((((.((((((((((......)))))))))).))))))))))..))).))).)))))

Structure

     g   c   -a          c          aa 
gugca ugc cuu  caagaaggug cauucaugug  c
||||| ||| |||  |||||||||| ||||||||||   
caugu aug GAA  GUUCUUCCGC GUAAGUauau  u
     a   A   GA          U          aa 

Annotation confidence Not enough data

Genome context

chrX: 134379256-134379332 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-513f-1

Mature cja-miR-513f-3p

• Accession: MIMAT0039670
• Description: Callithrix jacchus cja-miR-513f-3p mature miRNA
• Sequence: 46 - UGAAUGUCGCCUUCUUGAGAAGA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857