Stem-loop cja-mir-513e

Accession

MI0032217

Description

Callithrix jacchus cja-mir-513e precursor miRNA

Sequence

gggacaccacaugcgcaguacaugcuguacauuacucUUCUCAAGAAGGUGACAUUCAUauuuuaguugacaugaaugacagcuccuugugaagggcacugcaugcugaauggcugaauguggcauccc
((((..((((((...((((.(((((((((.....((((((.((((.((.((.(((((((.((......)).))))))).)).)).)))).))))))...)))).))...))))))).))))))..))))

Structure

    ca      gcg    a   ---  -    cauua      U    A  G  A       a  uu 
ggga  ccacau   cagu cau   gc ugua     cucUUC CAAG AG UG CAUUCAU uu  a
||||  ||||||   |||| |||   || ||||     |||||| |||| || || ||||||| ||   
cccu  ggugua   gucg gua   cg acgu     gggaag guuc uc ac guaagua ag  g
    ac      --a    -   agu  u    --cac      u    c  g  a       c  uu 

Annotation confidence Not enough data

Genome context

chrX: 134336704-134336832 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-513e

Mature cja-miR-513e-3p

• Accession: MIMAT0039675
• Description: Callithrix jacchus cja-miR-513e-3p mature miRNA
• Sequence: 38 - UUCUCAAGAAGGUGACAUUCAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857