Stem-loop cja-mir-9913

Accession

MI0032218

Description

Callithrix jacchus cja-mir-9913 precursor miRNA

Sequence

49 reads, 5.0 reads per million, 1 experiments

gagaaagaguccugccgagcaggAAAGAUGGGCAAAGACAGAGAcagucaaaagucgucuuugucacugcccaucccuccugcuccucugggccucccuuucuc
(((((((.((((....((((((((..((((((((..(((((((((.(.(....).))))))))))..))))))))..))))))))....))))....)))))))

Structure

       ---a    ugcc        AA        AA         a u a 
gagaaag    gucc    gagcaggA  GAUGGGCA  GACAGAGAc g c a
|||||||    ||||    ||||||||  ||||||||  ||||||||| | |  
cucuuuc    cggg    cucguccu  cuacccgu  cuguuucug c g a
       ccuc    ucuc        cc        ca         - u a 

Annotation confidence Not enough data

Genome context

ref|NC_071442.1|: 179560294-179560397 [-]

Mature cja-miR-9913-5p

• Accession: MIMAT0039676
• Description: Callithrix jacchus cja-miR-9913-5p mature miRNA
• Sequence: 24 - AAAGAUGGGCAAAGACAGAGA - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857