Stem-loop cja-mir-9915

Accession

MI0032220

Description

Callithrix jacchus cja-mir-9915 precursor miRNA

Sequence

13 reads, 1.0 reads per million, 1 experiments

ggcuuggccaaauaauuuucuuucuaucuuuggucuguucccagccuaccaucuucggAACAGAACAAAGAUAGAAAGAAaauuauuuggcuuuggcc
((((.(((((((((((((((((((((((((((.((((((((...............)))))))).)))))))))))))))))))))))))))..))))

Structure

    -u                           g        cagccu 
ggcu  ggccaaauaauuuucuuucuaucuuug ucuguucc      a
||||  ||||||||||||||||||||||||||| ||||||||      c
ccgg  ucgguuuauuaaAAGAAAGAUAGAAAC AGACAAgg      c
    uu                           A        cuucua 

Annotation confidence Not enough data

Genome context

ref|NC_071451.1|: 105140907-105141004 [-]

Mature cja-miR-9915-3p

• Accession: MIMAT0039678
• Description: Callithrix jacchus cja-miR-9915-3p mature miRNA
• Sequence: 59 - AACAGAACAAAGAUAGAAAGAA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857