Stem-loop cja-mir-9916

Accession

MI0032221

Description

Callithrix jacchus cja-mir-9916 precursor miRNA

Sequence

caggucugugccgacAACUGAAGGCUGGAGCUGUCGuucauauguguguugacaguucuugcuuuucagcccgucggcguucgccug
(((((...(((((((..((((((((.((((((((((..(((....))).)))))))))).)).))))))...)))))))...)))))

Structure

     cug       -AA      -  U          uu   a 
caggu   ugccgac   CUGAAG GC GGAGCUGUCG  cau u
|||||   |||||||   |||||| || ||||||||||  |||  
guccg   gcggcug   gacuuu cg ucuugacagu  gug g
     cuu       ccc      u  u          -u   u 

Annotation confidence Not enough data

Genome context

chr4: 162203560-162203646 [-]

Mature cja-miR-9916

• Accession: MIMAT0039679
• Description: Callithrix jacchus cja-miR-9916 mature miRNA
• Sequence: 16 - AACUGAAGGCUGGAGCUGUCG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857