Stem-loop cja-mir-9952c

Accession

MI0032235

Description

Callithrix jacchus cja-mir-9952c precursor miRNA

Sequence

23 reads, 2.0 reads per million, 1 experiments

ugucaagugaguaucauuuuugacugccauugugaaucaggccucagcugucauggacuccagcuaccagucacuggagcuuaugaccaACUGAGACCUGAUUGAUGAUGUcgguccaaaggugacaucacugaca
(((((.((((...(((((((((((((.((((((.(((((((.(((((..(((((((.((((((..........)))))).)))))))...))))).))))))).)))))).)))).)))))))))..)))))))))

Structure

     a    gua         -    c      g       c     -cu       a      cuac 
uguca guga   ucauuuuug acug cauugu aaucagg cucag   gucaugg cuccag    c
||||| ||||   ||||||||| |||| |||||| ||||||| |||||   ||||||| ||||||     
acagu cacu   aguggaaac uggc GUAGUA UUAGUCC GAGUC   caguauu gagguc    a
     -    -ac         c    U      G       A     Aac       c      acug 

Annotation confidence Not enough data

Genome context

ref|NC_071442.1|: 185818216-185818351 [-]

Mature cja-miR-9952c-3p

• Accession: MIMAT0039691
• Description: Callithrix jacchus cja-miR-9952c-3p mature miRNA
• Sequence: 90 - ACUGAGACCUGAUUGAUGAUGU - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857