Stem-loop cja-mir-548w

Accession

MI0032245

Description

Callithrix jacchus cja-mir-548w precursor miRNA

Sequence

agcaaauauuagauugguacaaaaguaaucgccguuuuugccauuaguguaaauuaaguaAUGGCCAAAAUGGCGAUUACUuuugcacugaccuaauagcu
(((...((((((.(((((.(((((((((((((((((((.(((((((.(........).))))))).))))))))))))))))))).))))).)))))))))

Structure

   aaa      a     a                   u       g gua 
agc   uauuag uuggu caaaaguaaucgccguuuu gccauua u   a
|||   |||||| ||||| ||||||||||||||||||| ||||||| |    
ucg   auaauc aguca guuuUCAUUAGCGGUAAAA CGGUAau a   a
   ---      c     c                   C       g auu 

Annotation confidence Not enough data

Genome context

chr13: 11191044-11191144 [-]

Mature cja-miR-548w

• Accession: MIMAT0039701
• Description: Callithrix jacchus cja-miR-548w mature miRNA
• Sequence: 61 - AUGGCCAAAAUGGCGAUUACU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857