Stem-loop cja-mir-9942

Accession

MI0032257

Description

Callithrix jacchus cja-mir-9942 precursor miRNA

Sequence

ccugccccgcggccacgccccccggagaacgccucggcgcgcggccgccggagccgccguuuaauuggggcugucaggccgcggugcgcgcggagggCCGGGCGGGCGGGACGGAGGccgg
((.((((((...((.((((((((((....(.((((.(((((((.((((.((((((.(((......)))))))......))))))))))))).)))))))))).))))))).))).))).))

Structure

  u   -   cgg  a     -     agaa g    g       g    c  ------    g   uu 
cc gcc ccg   cc cgccc cccgg    c ccuc gcgcgcg ccgc gg      agcc ccg  u
|| ||| |||   || ||||| |||||    | |||| ||||||| |||| ||      |||| |||   
gg cGG GGC   GG GCGGG GGGCC    g ggag cgcgcgu ggcg cc      ucgg ggu  a
  c   A   --A  -     C     ---- -    g       -    -  ggacug    -   ua 

Annotation confidence Not enough data

Genome context

chr15: 27804955-27805075 [-]

Mature cja-miR-9942

• Accession: MIMAT0039712
• Description: Callithrix jacchus cja-miR-9942 mature miRNA
• Sequence: 98 - CCGGGCGGGCGGGACGGAGG - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857