Stem-loop cja-mir-9943

Accession

MI0032258

Description

Callithrix jacchus cja-mir-9943 precursor miRNA

Sequence

gccuccuuguuaggggcugcggggagcgauaauuggggugguuagcuggagaacaucugcgagggucCUCACAUGAUGAACAGACCUGAAGacccagagauagucguuauccagugagaugagggggc
(((((((((((....((((.((..((((((.(((.((((..(((((((.....((((((.(((....))).)).))))..)))..))))..))))...))).)))))).))))))..)))))))))))

Structure

           aggg    c  gg      a   --g    gg    --   gagaa    -  c   g 
gccuccuuguu    gcug gg  agcgau auu   gggu  uuag  cug     cauc ug gag g
|||||||||||    |||| ||  |||||| |||   ||||  ||||  |||     |||| || |||  
cgggggaguag    ugac cu  uugcug uag   ccca  AGUC  GAC     GUAG AC CUC u
           --ag    -  -a      a   aga    GA    CA   ---AA    U  A   c 

Annotation confidence Not enough data

Genome context

chr11: 21357653-21357780 [+]

Mature cja-miR-9943

• Accession: MIMAT0039713
• Description: Callithrix jacchus cja-miR-9943 mature miRNA
• Sequence: 68 - CUCACAUGAUGAACAGACCUGAAG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857