Stem-loop cja-mir-9948a

Accession

MI0032259

Description

Callithrix jacchus cja-mir-9948a precursor miRNA

Sequence

gccucagccucccaaagugCUCGGAUUACAGGUAUGAACCAcagugcccagcccccccuccuuuauuuauuuauuuuuuuaagaacugggguuucacagugguucacaccuguaauccuagcacuuuggaaggccaaggc
((((..((((.((((((((((.(((((((((((.((((((((.(((...((((((.....(((.................)))....)))))).))).)))))))).))))))))))).)))))))))).))))..))))

Structure

    ca    c          C           A        a   ccc      cccuc   uauuuau 
gccu  gccu ccaaagugCU GGAUUACAGGU UGAACCAc gug   agcccc     cuu       u
||||  |||| |||||||||| ||||||||||| |||||||| |||   ||||||     |||       u
cgga  cgga gguuucacga ccuaaugucca acuuggug cac   uugggg     gaa       a
    ac    a          u           c        a   --u      -ucaa   uuuuuuu 

Annotation confidence Not enough data

Genome context

chr5: 78995229-78995368 [+]

Mature cja-miR-9948a

• Accession: MIMAT0039714
• Description: Callithrix jacchus cja-miR-9948a mature miRNA
• Sequence: 20 - CUCGGAUUACAGGUAUGAACCA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857