miRBase entry: cja-mir-891c

Stem-loop cja-mir-891c

Accession

MI0032261

Description

Callithrix jacchus cja-mir-891c precursor miRNA

Sequence

ucucuucuugacccCUGCAGCAGACCUGUGCACUGAgucaggaaaaccuucagugucacugguuuguugcaauggucaagggaga
(((((.(((((((..(((((((((((.(((((((((...(((....))))))))).))).)))))))))))..))))))))))))

Structure

     u       cC           U   -      guc   a 
ucucu cuugacc  UGCAGCAGACC GUG CACUGA   agg a
||||| |||||||  ||||||||||| ||| ||||||   |||  
agagg gaacugg  acguuguuugg cac gugacu   ucc a
     -       ua           u   u      ---   a

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chrX: 133256215-133256299 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-891c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-891c

Accession	MIMAT0039716
Description	Callithrix jacchus cja-miR-891c mature miRNA
Sequence	15 - CUGCAGCAGACCUGUGCACUGA - 36
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857