Stem-loop cja-mir-9948b

Accession

MI0032267

Description

Callithrix jacchus cja-mir-9948b precursor miRNA

Sequence

cagccucugaaaGCGCUAGGAUUACAUGUGUGAcccacugagccuauuauuguaaacagcauuaaaaguaauguuuccuggucgggcacgguggcucacaccuguaauccuagcacuuugggaggcug
((((((((.((((.((((((((((((.((((((.((((((.((((((((..(.(((((..(((...)))..)))))).)))).)))).)))))).)))))).)))))))))))).)))).))))))))

Structure

        g    C            U      c      a    -    uu u     gc   a 
cagccucu aaaG GCUAGGAUUACA GUGUGA ccacug gccu auua  g aaaca  auu  
|||||||| |||| |||||||||||| |||||| |||||| |||| ||||  | |||||  ||| a
gucggagg uuuc cgauccuaaugu cacacu gguggc cggg uggu  c uuugu  uga  
        g    a            c      c      a    c    -c -     aa   a 

Annotation confidence Not enough data

Genome context

chr22: 32242962-32243089 [+]

Mature cja-miR-9948b

• Accession: MIMAT0039722
• Description: Callithrix jacchus cja-miR-9948b mature miRNA
• Sequence: 13 - GCGCUAGGAUUACAUGUGUGA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857