Stem-loop cja-mir-9955

Accession

MI0032276

Description

Callithrix jacchus cja-mir-9955 precursor miRNA

Sequence

cugUAUGUUGUUCAGCAUUUCCCUCaacuaaaguaugaauuuuaagcaauuaggugauguaauaaauguguguaauagaauccauauguuuaaaagaggaaguggugacgguauuaaccuacag
(((((.((((.(((.(((((((.((...(((((((((.((((((.(((..((.((..........)).)))))..)))))).))))).))))...))))))))).)))......)))).)))))

Structure

     U    -----U   G       C  aac    -     a      -a   au  g  gaug 
cugUA GUUG      UCA CAUUUCC UC   uaaa guaug auuuua  gca  ua gu    u
||||| ||||      ||| ||||||| ||   |||| ||||| ||||||  |||  || ||     
gacau caau      agu gugaagg ag   auuu uauac uaagau  ugu  gu ua    a
     c    uauggc   g       -  aaa    g     c      aa   --  g  aaua 

Annotation confidence Not enough data

Genome context

chr2: 112906577-112906700 [-]

Mature cja-miR-9955

• Accession: MIMAT0039730
• Description: Callithrix jacchus cja-miR-9955 mature miRNA
• Sequence: 4 - UAUGUUGUUCAGCAUUUCCCUC - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857