Stem-loop cja-mir-9956

Accession

MI0032277

Description

Callithrix jacchus cja-mir-9956 precursor miRNA

Sequence

cagcucugggggccguuguucggugcuggggcugacagaggaggcucggugucuacagcuagcaagUCAACGUUUCUCCUCUUGUCCcuggugagguguagcggcggcacacggcug
(((((.((...(((((((((((.((((((((...((((((((((..((.((.((..........)).)).))..))))))).))))))))))..).)).))))))))).)).)))))

Structure

     c  ggg         -  g --       cug   -       cu  g  u  acag 
cagcu ug   gccguuguu cg u  gcugggg   aca gaggagg  cg ug cu    c
||||| ||   ||||||||| || |  |||||||   ||| |||||||  || || ||     
gucgg ac   cggcggcga gu g  uggucCC   UGU CUCCUCU  GC AC ga    u
     c  --a         u  g ag       ---   U       UU  A  U  acga 

Annotation confidence Not enough data

Genome context

chr9: 102402617-102402733 [+]

Mature cja-miR-9956

• Accession: MIMAT0039731
• Description: Callithrix jacchus cja-miR-9956 mature miRNA
• Sequence: 67 - UCAACGUUUCUCCUCUUGUCC - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857