Stem-loop cja-mir-9957-2

Accession

MI0032279

Description

Callithrix jacchus cja-mir-9957-2 precursor miRNA

Sequence

6 reads, 1.0 reads per million, 1 experiments

uagagaaaccccuacaugacaucaccucucugaaagccacacauacauguauuUCAGAGAGGUGAUGUCAUGUAGggguuucucua
(((((((((((((((((((((((((((((((((((..((........))..)))))))))))))))))))))))))))))))))))

Structure

                                   gc  cac 
uagagaaaccccuacaugacaucaccucucugaaa  ca   a
|||||||||||||||||||||||||||||||||||  ||    
aucucuuugggGAUGUACUGUAGUGGAGAGACUuu  gu   u
                                   au  aca 

Annotation confidence Not enough data

Genome context

ref|NC_071455.1|: 48984514-48984599 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-9957-2

Mature cja-miR-9957-3p

• Accession: MIMAT0039732
• Description: Callithrix jacchus cja-miR-9957-3p mature miRNA
• Sequence: 54 - UCAGAGAGGUGAUGUCAUGUAG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857