Stem-loop cja-mir-9966

Accession

MI0032288

Description

Callithrix jacchus cja-mir-9966 precursor miRNA

Sequence

7 reads, 1.0 reads per million, 1 experiments

cccuccuggguccuccauuuccucaUCUGGCACAUGGACAGAUGGCugacccauccccagagucgccuuguuguuccugccccaggugcggcagcuggugccucggaggg
((((((.((((...(((.((((.(((((((..((.((((((..(((.(((.(.......).))))))...)))))).))..))))))).)).)).))).)))).))))))

Structure

      u    ccu   u  -  u       CA  U      -AU   u   c au 
cccucc gggu   cca uu cc caUCUGG  CA GGACAG   GGC gac c  c
|||||| ||||   ||| || || |||||||  || ||||||   ||| ||| |  c
gggagg uccg   ggu ga gg guggacc  gu cuuguu   ccg cug g  c
      c    --u   c  c  c       cc  c      guu   -   a ac 

Annotation confidence Not enough data

Genome context

ref|NC_071451.1|: 99766466-99766575 [-]

Mature cja-miR-9966-5p

• Accession: MIMAT0039741
• Description: Callithrix jacchus cja-miR-9966-5p mature miRNA
• Sequence: 26 - UCUGGCACAUGGACAGAUGGC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857