Stem-loop cja-mir-9971

Accession

MI0032294

Description

Callithrix jacchus cja-mir-9971 precursor miRNA

Sequence

gacuccaagccaggguuucugucuUGCGGAUUGGUUCUUUCUGCUCCaucucagugccguucucacccaaaugccggugagcaaggaguagccagcccgaucugggagccacaccuggcuggaguc
(((((((.((((((.....((.(((.((((((((..((..(((((((.(((((.((.((((........)))).)).)))).).)))))))..)).)))))))).))).))..)))))))))))))

Structure

       a      guuuc  u   G        UU  UU       a -    g  c    cuc 
gacucca gccagg     ug cuU CGGAUUGG  CU  CUGCUCC u cuca ug cguu   a
||||||| ||||||     || ||| ||||||||  ||  ||||||| | |||| || ||||    
cugaggu cggucc     ac gag gucuagcc  ga  gaugagg a gagu gc guaa   c
       -      ---ac  c   g        -c  cc       a c    g  c    acc 

Annotation confidence Not enough data

Genome context

chr5: 36873470-36873595 [-]

Mature cja-miR-9971

• Accession: MIMAT0039747
• Description: Callithrix jacchus cja-miR-9971 mature miRNA
• Sequence: 25 - UGCGGAUUGGUUCUUUCUGCUCC - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857