Stem-loop cja-mir-9973

Accession

MI0032297

Description

Callithrix jacchus cja-mir-9973 precursor miRNA

Sequence

gagcacugugguaccacagcagUGGCUCUGGAUCAGAACUCUGCucuccuaggggcuagaugcagagaccugguacccaaggccucuguucugaugccauucuc
.......((((((.((.(((((.((((.((((((((..(((((((((((....))..))).))))))..)))))..))).)))).))))).)).))))))....

Structure

gagcacu      c  c     U    C   --     AA      -   --  u 
       guggua ca agcag GGCU UGG  AUCAG  CUCUGC ucu  cc a
       |||||| || ||||| |||| |||  |||||  |||||| |||  ||  
       uaccgu gu uuguc ccgg acc  ugguc  gagacg aga  gg g
---cucu      a  c     u    a   ca     ca      u   uc  g 

Annotation confidence Not enough data

Genome context

chr1: 117034774-117034877 [-]

Mature cja-miR-9973

• Accession: MIMAT0039749
• Description: Callithrix jacchus cja-miR-9973 mature miRNA
• Sequence: 23 - UGGCUCUGGAUCAGAACUCUGC - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857