miRBase entry: cja-mir-9976-1

Stem-loop cja-mir-9976-1

Accession

MI0032300

Description

Callithrix jacchus cja-mir-9976-1 precursor miRNA

Sequence

guuaaauuuucagucuuucccacuagaauguaagagccacaacagcauggcucUUACAUUCUAGUGGGAAAGACUgaaaauuuugc
((.((((((((((((((((((((((((((((((((((((........)))))))))))))))))))))))))))))))))))).))

Structure

  u                                    caa 
gu aaauuuucagucuuucccacuagaauguaagagcca   c
|| ||||||||||||||||||||||||||||||||||||    
cg uuuaaaagUCAGAAAGGGUGAUCUUACAUUcucggu   a
  u                                    acg

Annotation confidence Not enough data

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Genome context

chr2: 79514439-79514524 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-9976-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-9976

Accession	MIMAT0039752
Description	Callithrix jacchus cja-miR-9976 mature miRNA
Sequence	54 - UUACAUUCUAGUGGGAAAGACU - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857