miRBase entry: cja-mir-653

Stem-loop cja-mir-653

Accession

MI0032304

Description

Callithrix jacchus cja-mir-653 precursor miRNA

Sequence

ucauuccuucagugUUGAGACAAUCUCUACUGAAUCagcuuuaaacaaguucacuagaguuuguuucaauauugcaagaauga
((((((...((((((((((((((.(((((.(((((.............))))).))))).))))))))))))))...))))))

Structure

      cuu              U     C     Cagcu 
ucauuc   cagugUUGAGACAA CUCUA UGAAU     u
||||||   |||||||||||||| ||||| |||||     u
aguaag   guuauaacuuuguu gagau acuug     a
      aac              u     c     aacaa

Annotation confidence Not enough data

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Genome context

chr8: 54010958-54011040 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-653

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-653

Accession	MIMAT0039755
Description	Callithrix jacchus cja-miR-653 mature miRNA
Sequence	15 - UUGAGACAAUCUCUACUGAAUC - 36
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857