Stem-loop hsa-mir-548bc

Accession

MI0032315

Description

Homo sapiens hsa-mir-548bc precursor miRNA

Literature search

41 open access papers mention hsa-mir-548bc
(143 sentences)

Sequence

5038 reads, 17.0 reads per million, 144 experiments

ucuuuuguuacagguuggugAGAAGUAAUCGCGGUUUUUGccauuacugcucauggcAAAAACUGUGAUUACUUUUGCAccaaccuaauauaauauuuggucuucaauua
....((((...(((((((((((((((((((((((((((((((((........)))))))))))))))))))))))).)))))))))...)))).................

Structure

-------------ucuu    uac         -                        uac 
                 uugu   agguuggug AGAAGUAAUCGCGGUUUUUGccau   u
                 ||||   ||||||||| ||||||||||||||||||||||||    
                 aaua   uccaaccAC UUUUCAUUAGUGUCAAAAAcggua   g
auuaacuucugguuuau    uaa         G                        cuc 

Annotation confidence Medium

Genome context

chr17: 39297400-39297509 [+]

Mature hsa-miR-548bc-5p

• Accession: MIMAT0050674
• Description: Homo sapiens hsa-miR-548bc-5p mature miRNA
• Sequence: 21 - AGAAGUAAUCGCGGUUUUUG - 40
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548bc-3p

• Accession: MIMAT0039765
• Description: Homo sapiens hsa-miR-548bc-3p mature miRNA
• Sequence: 58 - AAAAACUGUGAUUACUUUUGCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25215888
   Comparison of hepatocellular carcinoma miRNA expression profiling as evaluated by next generation sequencing and microarray
   Murakami Y, Tanahashi T, Okada R, Toyoda H, Kumada T, Enomoto M, Tamori A, Kawada N, Taguchi YH, Azuma T
   PLoS One (2014) 9:e106314