Stem-loop pal-mir-140

Accession

MI0032323

Description

Pteropus alecto pal-mir-140 precursor miRNA

Sequence

CAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuACCACAGGGUAGAACCACGGA
..(((((((((((((.(((((((.((.((...)))).))))))).)))))))))))))...

Structure

-CA             A       u  c  c 
   GUGGUUUUACCCU UGGUAGg ua gu  
   ||||||||||||| ||||||| || || a
   CACCAAGAUGGGA ACCAucu gu cg  
AGG             C       u  -  u 

Annotation confidence Not enough data

Genome context

KB030572.1: 13265168-13265228 [+]

Mature pal-miR-140-5p

• Accession: MIMAT0039778
• Description: Pteropus alecto pal-miR-140-5p mature miRNA
• Sequence: 1 - CAGUGGUUUUACCCUAUGGUAG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-140-3p

• Accession: MIMAT0039779
• Description: Pteropus alecto pal-miR-140-3p mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682