Stem-loop pal-mir-34c

Accession

MI0032331

Description

Pteropus alecto pal-mir-34c precursor miRNA

Sequence

AGGCAGUGUAGUUAGCUGAUUGCuaauaguaccAAUCACUAACCACACGGCCAGG
.(((.((((.(((((.((((((.((....)).))))))))))).)))).)))...

Structure

--A   A    A     C      C  a 
   GGC GUGU GUUAG UGAUUG ua u
   ||| |||| ||||| |||||| ||  
   CCG CACA CAAUC ACUAAc au a
GGA   G    C     -      c  g 

Annotation confidence Not enough data

Genome context

KB030667.1: 5971006-5971060 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-34c

Mature pal-miR-34c-5p

• Accession: MIMAT0039791
• Description: Pteropus alecto pal-miR-34c-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAGUUAGCUGAUUGC - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-34c-3p

• Accession: MIMAT0039792
• Description: Pteropus alecto pal-miR-34c-3p mature miRNA
• Sequence: 34 - AAUCACUAACCACACGGCCAGG - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682