Stem-loop pal-mir-206

Accession

MI0032334

Description

Pteropus alecto pal-mir-206 precursor miRNA

Sequence

ACAUGCUUCUUUAUAUCCCCAUacggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((((((....)))).))))).))))))))))))))))..

Structure

--                CC     -    u 
  ACAUGCUUCUUUAUAU  CCAUa cgga u
  ||||||||||||||||  ||||| ||||  
  UGUGUGAAGGAAUGUA  GGUau guuu a
GG                -A     c    c 

Annotation confidence Not enough data

Genome context

KB031158.1: 33912881-33912940 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-206

Mature pal-miR-206-5p

• Accession: MIMAT0039797
• Description: Pteropus alecto pal-miR-206-5p mature miRNA
• Sequence: 1 - ACAUGCUUCUUUAUAUCCCCAU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-206-3p

• Accession: MIMAT0039798
• Description: Pteropus alecto pal-miR-206-3p mature miRNA
• Sequence: 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682