Stem-loop pal-mir-29a

Accession

MI0032336

Description

Pteropus alecto pal-mir-29a precursor miRNA

Sequence

ACUGAUUUCUUUUGGUGUUCAGagucaauacaauuuucUAGCACCAUCUGAAAUCGGUUA
(((((((((...(((((((.((((...........)))))))))))...)))))))))..

Structure

--         UUU       C    ucaa 
  ACUGAUUUC   UGGUGUU AGag    u
  |||||||||   ||||||| ||||    a
  UGGCUAAAG   ACCACGA Ucuu    c
AU         UCU       -    uuaa 

Annotation confidence Not enough data

Genome context

KB030581.1: 8754036-8754095 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-29a

Mature pal-miR-29a-5p

• Accession: MIMAT0039801
• Description: Pteropus alecto pal-miR-29a-5p mature miRNA
• Sequence: 1 - ACUGAUUUCUUUUGGUGUUCAG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-29a-3p

• Accession: MIMAT0039802
• Description: Pteropus alecto pal-miR-29a-3p mature miRNA
• Sequence: 39 - UAGCACCAUCUGAAAUCGGUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682