Stem-loop pal-mir-192

Accession

MI0032338

Description

Pteropus alecto pal-mir-192 precursor miRNA

Sequence

CUGACCUAUGAGUUGACAGCCAgugcucuugucuccccucuggCUGCCAAUUCCAUAGGUCACAGG
.((((((((((((((.(((((((................))))))).))))).)))))))))....

Structure

---C         -     A       ugcucuu 
    UGACCUAUG AGUUG CAGCCAg       g
    ||||||||| ||||| |||||||        
    ACUGGAUAC UUAAC GUCgguc       u
GGAC         C     C       uccccuc 

Annotation confidence Not enough data

Genome context

KB030625.1: 6029664-6029729 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-192

Mature pal-miR-192-5p

• Accession: MIMAT0039805
• Description: Pteropus alecto pal-miR-192-5p mature miRNA
• Sequence: 1 - CUGACCUAUGAGUUGACAGCCA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-192-3p

• Accession: MIMAT0039806
• Description: Pteropus alecto pal-miR-192-3p mature miRNA
• Sequence: 44 - CUGCCAAUUCCAUAGGUCACAGG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682