Stem-loop pal-mir-30d

Accession

MI0032348

Description

Pteropus alecto pal-mir-30d precursor miRNA

Sequence

UGUAAACAUCCCCGACUGGAAGCUguaagaccgagcucagCUUUCAGUCAGAUGUUUGCUGC
.(((((((((...((((((((((((............)))))))))))).)))))))))...

Structure

--U         CCC            uaaga 
   GUAAACAUC   GACUGGAAGCUg     c
   |||||||||   ||||||||||||      
   CGUUUGUAG   CUGACUUUCgac     c
CGU         --A            ucgag 

Annotation confidence Not enough data

Genome context

KB030670.1: 2849228-2849289 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-30d

Mature pal-miR-30d-5p

• Accession: MIMAT0039824
• Description: Pteropus alecto pal-miR-30d-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCCCGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature pal-miR-30d-3p

• Accession: MIMAT0039825
• Description: Pteropus alecto pal-miR-30d-3p mature miRNA
• Sequence: 41 - CUUUCAGUCAGAUGUUUGCUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682