Stem-loop pal-mir-99b

Accession

MI0032353

Description

Pteropus alecto pal-mir-99b precursor miRNA

Sequence

CACCCGUAGAACCGACCUUGCGgggccuucgccgcacaCAAGCUCGUGUCUGUGGGUCCGU
.(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))....

Structure

---C         AC   C    --C g   c 
    ACCCGUAGA  CGA CUUG   G ggc u
    |||||||||  ||| ||||   | |||  
    UGGGUGUCU  GCU GAAC   c ccg u
UGCC         GU   C    aca g   c 

Annotation confidence Not enough data

Genome context

KB030309.1: 360656-360716 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-99b

Mature pal-miR-99b-5p

• Accession: MIMAT0039834
• Description: Pteropus alecto pal-miR-99b-5p mature miRNA
• Sequence: 1 - CACCCGUAGAACCGACCUUGCG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-99b-3p

• Accession: MIMAT0039835
• Description: Pteropus alecto pal-miR-99b-3p mature miRNA
• Sequence: 39 - CAAGCUCGUGUCUGUGGGUCCGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682