Stem-loop pal-mir-99a

Accession

MI0032360

Description

Pteropus alecto pal-mir-99a precursor miRNA

Sequence

AACCCGUAGAUCCGAUCUUGUggugaaguggaccgcaCAAGCUCGCUUCUAUGGGUCUGU
.(((((((((..(((.((((((.((........)))))))).)))..)))))))))....

Structure

---A         UC   U      g  aag 
    ACCCGUAGA  CGA CUUGUg ug   u
    |||||||||  ||| |||||| ||    
    UGGGUAUCU  GCU GAACac gc   g
UGUC         UC   C      -  cag 

Annotation confidence Not enough data

Genome context

KB030499.1: 10578171-10578230 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-99a

Mature pal-miR-99a-5p

• Accession: MIMAT0039848
• Description: Pteropus alecto pal-miR-99a-5p mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAUCUUGU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-99a-3p

• Accession: MIMAT0039849
• Description: Pteropus alecto pal-miR-99a-3p mature miRNA
• Sequence: 38 - CAAGCUCGCUUCUAUGGGUCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682