Stem-loop pal-mir-202

Accession

MI0032369

Description

Pteropus alecto pal-mir-202 precursor miRNA

Sequence

UUCCUAUGCAUAUACUUCUUUgagggucuggccuaaAGAGGUGUAGGGCAUGGGAA
.((((((((.(((((((((((.(((......))))))))))))))..)))))))).

Structure

U        -A           g   gu 
 UCCUAUGC  UAUACUUCUUU agg  c
 ||||||||  ||||||||||| |||   
 AGGGUACG  AUGUGGAGAaa ucc  u
A        GG           -   gg 

Annotation confidence Not enough data

Genome context

KB030668.1: 213379-213434 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-202

Mature pal-miR-202-5p

• Accession: MIMAT0039862
• Description: Pteropus alecto pal-miR-202-5p mature miRNA
• Sequence: 1 - UUCCUAUGCAUAUACUUCUUU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-202-3p

• Accession: MIMAT0039863
• Description: Pteropus alecto pal-miR-202-3p mature miRNA
• Sequence: 37 - AGAGGUGUAGGGCAUGGGAA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682