Stem-loop pal-mir-30c

Accession

MI0032379

Description

Pteropus alecto pal-mir-30c precursor miRNA

Sequence

UGUAAACAUCCUACACUCUCAGCUguggaaaguaagaaagCUGGGAGAAGGCUGUUUACU
.(((((((.(((...(((((((((..............))))))))).))).))))))).

Structure

U       U   ACA         guggaa 
 GUAAACA CCU   CUCUCAGCU      a
 ||||||| |||   |||||||||       
 CAUUUGU GGA   GAGGGUCga      g
U       C   --A         aagaau 

Annotation confidence Not enough data

Genome context

KB031158.1: 22234409-22234468 [+]

Mature pal-miR-30c-5p

• Accession: MIMAT0039880
• Description: Pteropus alecto pal-miR-30c-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCUCAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature pal-miR-30c-3p

• Accession: MIMAT0039881
• Description: Pteropus alecto pal-miR-30c-3p mature miRNA
• Sequence: 41 - CUGGGAGAAGGCUGUUUACU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682