Stem-loop pal-mir-34b

Accession

MI0032384

Description

Pteropus alecto pal-mir-34b precursor miRNA

Sequence

AGGCAGUGUAAUUAGCUGAUUGUacucuggugcuuacaAUCACUAACUCCACUGCCAUC
.(((((((...((((.((((((((..(....)..))))))))))))...)))))))...

Structure

--A       UAA    C        cu u 
   GGCAGUG   UUAG UGAUUGUa  c g
   |||||||   |||| ||||||||  |  
   CCGUCAC   AAUC ACUAacau  g g
CUA       CUC    -        uc u 

Annotation confidence Not enough data

Genome context

KB030667.1: 5971582-5971640 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-34b

Mature pal-miR-34b-5p

• Accession: MIMAT0039888
• Description: Pteropus alecto pal-miR-34b-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAAUUAGCUGAUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-34b-3p

• Accession: MIMAT0039889
• Description: Pteropus alecto pal-miR-34b-3p mature miRNA
• Sequence: 39 - AUCACUAACUCCACUGCCAUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682