Stem-loop pal-mir-130

Accession

MI0032388

Description

Pteropus alecto pal-mir-130 precursor miRNA

Sequence

GCUCUUUUCACAUUGUGCUACugucugcaccuaccacuagCAGUGCAAUGUUAAAAGGGCAU
((((((((.((((((((((.(((..............))).)))))))))).))))))))..

Structure

--        C          A   ucugca 
  GCUCUUUU ACAUUGUGCU Cug      c
  |||||||| |||||||||| |||       
  CGGGAAAA UGUAACGUGA gau      c
UA        U          C   caccau 

Annotation confidence Not enough data

Genome context

KB030399.1: 622007-622068 [+]

Mature pal-miR-130-5p

• Accession: MIMAT0039895
• Description: Pteropus alecto pal-miR-130-5p mature miRNA
• Sequence: 1 - GCUCUUUUCACAUUGUGCUAC - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-130-3p

• Accession: MIMAT0039896
• Description: Pteropus alecto pal-miR-130-3p mature miRNA
• Sequence: 41 - CAGUGCAAUGUUAAAAGGGCAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682