Stem-loop pal-mir-194b

Accession

MI0032389

Description

Pteropus alecto pal-mir-194b precursor miRNA

Sequence

UGUAACAGCAACUCCAUGUGGAAgugcccacucauuCCAGUGGGGCUGCUGUUAUCUGG
.(((((((((.((((((.(((((...........))))))))))).)))))))))....

Structure

---U         A      G     gugc 
    GUAACAGCA CUCCAU UGGAA    c
    ||||||||| |||||| |||||    c
    UAUUGUCGU GGGGUG ACCuu    a
GGUC         C      -     acuc 

Annotation confidence Not enough data

Genome context

KB030625.1: 6029463-6029521 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-194b

Mature pal-miR-194b-5p

• Accession: MIMAT0039897
• Description: Pteropus alecto pal-miR-194b-5p mature miRNA
• Sequence: 1 - UGUAACAGCAACUCCAUGUGGAA - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-194b-3p

• Accession: MIMAT0039898
• Description: Pteropus alecto pal-miR-194b-3p mature miRNA
• Sequence: 37 - CCAGUGGGGCUGCUGUUAUCUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682