Stem-loop pal-mir-15b

Accession

MI0032393

Description

Pteropus alecto pal-mir-15b precursor miRNA

Sequence

UAGCAGCACAUCAUGGUUUACAuacuacagucgaugCGAAUCAUUAUUUGCUGCUCUA
.(((((((.((.(((((((.(((..........))).))))))).)).)))))))...

Structure

--U       C  C       A   acua 
   AGCAGCA AU AUGGUUU CAu    c
   ||||||| || ||||||| |||     
   UCGUCGU UA UACUAAG gua    a
AUC       U  U       C   gcug 

Annotation confidence Not enough data

Genome context

KB030499.1: 3797356-3797413 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-15b

Mature pal-miR-15b-5p

• Accession: MIMAT0039905
• Description: Pteropus alecto pal-miR-15b-5p mature miRNA
• Sequence: 1 - UAGCAGCACAUCAUGGUUUACA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-15b-3p

• Accession: MIMAT0039906
• Description: Pteropus alecto pal-miR-15b-3p mature miRNA
• Sequence: 37 - CGAAUCAUUAUUUGCUGCUCUA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682