Stem-loop pal-mir-126

Accession

MI0032395

Description

Pteropus alecto pal-mir-126 precursor miRNA

Sequence

486 reads, 144.0 reads per million, 1 experiments

CAUUAUUACUUUUGGUACGCGcugugacacuucaaacuCGUACCGUGAGUAAUAAUGCGc
(((((((((((.(((((((.....(((....)))....))))))).)))))))))))...

Structure

---           U       CGcug   c 
   CAUUAUUACUU UGGUACG     uga a
   ||||||||||| |||||||     |||  
   GUAAUAAUGAG GCCAUGC     acu c
cGC           U       -ucaa   u 

Annotation confidence High

Genome context

KB030979.1: 9573275-9573334 [+]

Mature pal-miR-126-5p

• Accession: MIMAT0039909
• Description: Pteropus alecto pal-miR-126-5p mature miRNA
• Sequence: 1 - CAUUAUUACUUUUGGUACGCG - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-126-3p

• Accession: MIMAT0039910
• Description: Pteropus alecto pal-miR-126-3p mature miRNA
• Sequence: 39 - CGUACCGUGAGUAAUAAUGCG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682