Stem-loop pal-mir-382

Accession

MI0032398

Description

Pteropus alecto pal-mir-382 precursor miRNA

Sequence

GAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgAAUCAUUCACGGACAACACUUU
...(((((((((((..(((((((.........).))))))..))))))))))).....

Structure

--GAA           UG      - uuu 
     GUUGUUCGUGG  GAUUCG c   a
     |||||||||||  |||||| |   c
     CAACAGGCACU  CUAAgc g   u
UUUCA           UA      a uau 

Annotation confidence Not enough data

Genome context

KB031153.1: 22096793-22096850 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from pal-mir-382

Mature pal-miR-382-5p

• Accession: MIMAT0039915
• Description: Pteropus alecto pal-miR-382-5p mature miRNA
• Sequence: 1 - GAAGUUGUUCGUGGUGGAUUCG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-382-3p

• Accession: MIMAT0039916
• Description: Pteropus alecto pal-miR-382-3p mature miRNA
• Sequence: 37 - AAUCAUUCACGGACAACACUUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682