Stem-loop pal-mir-424

Accession

MI0032400

Description

Pteropus alecto pal-mir-424 precursor miRNA

Sequence

CAGCAGCAAUUCAUGUUUUGAagugcuuuaaaagguuCAAAACGUGAGGCGCUGCUAU
.((((((..(((((((((((((.(.........).)))))))))))))..))))))..

Structure

-C      AA             g gcu 
  AGCAGC  UUCAUGUUUUGAa u   u
  ||||||  ||||||||||||| |   u
  UCGUCG  GAGUGCAAAACuu g   a
UA      CG             g aaa 

Annotation confidence Not enough data

Genome context

KB031071.1: 434108-434165 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from pal-mir-424

Mature pal-miR-424-5p

• Accession: MIMAT0039919
• Description: Pteropus alecto pal-miR-424-5p mature miRNA
• Sequence: 1 - CAGCAGCAAUUCAUGUUUUGA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-424-3p

• Accession: MIMAT0039920
• Description: Pteropus alecto pal-miR-424-3p mature miRNA
• Sequence: 38 - CAAAACGUGAGGCGCUGCUAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682