Stem-loop pal-mir-106b

Accession

MI0032408

Description

Pteropus alecto pal-mir-106b precursor miRNA

Sequence

UAAAGUGCUGACAGUGCAGAUAgugauccucuccgugcuaCCGCACUGUGGGUACUUGCUGC
..(((((((.(((((((.(.((((............))))).))))))).))))))).....

Structure

---UA       G       A A    gaucc 
     AAGUGCU ACAGUGC G UAgu     u
     ||||||| ||||||| | ||||      
     UUCAUGG UGUCACG C aucg     c
CGUCG       G       C -    ugccu 

Annotation confidence Not enough data

Genome context

KB030994.1: 9351975-9352036 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-106b

Mature pal-miR-106b-5p

• Accession: MIMAT0039935
• Description: Pteropus alecto pal-miR-106b-5p mature miRNA
• Sequence: 1 - UAAAGUGCUGACAGUGCAGAUA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-106b-3p

• Accession: MIMAT0039936
• Description: Pteropus alecto pal-miR-106b-3p mature miRNA
• Sequence: 41 - CCGCACUGUGGGUACUUGCUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682