Stem-loop pal-mir-15a

Accession

MI0032411

Description

Pteropus alecto pal-mir-15a precursor miRNA

Sequence

UAGCAGCACAUAAUGGUUUGUggguuuugaaaaggugCAGGCCAUAUUGUGCUGCCUCAAA
..((((((((..((((((((((.............))))))))))..))))))))......

Structure

----UA        UA          gguuu 
      GCAGCACA  AUGGUUUGUg     u
      ||||||||  ||||||||||     g
      CGUCGUGU  UACCGGACgu     a
AAACUC        UA          ggaaa 

Annotation confidence Not enough data

Genome context

KB030546.1: 3176731-3176791 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-15a

Mature pal-miR-15a-5p

• Accession: MIMAT0039941
• Description: Pteropus alecto pal-miR-15a-5p mature miRNA
• Sequence: 1 - UAGCAGCACAUAAUGGUUUGU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-15a-3p

• Accession: MIMAT0039942
• Description: Pteropus alecto pal-miR-15a-3p mature miRNA
• Sequence: 38 - CAGGCCAUAUUGUGCUGCCUCAAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682