Stem-loop pal-mir-493

Accession

MI0032412

Description

Pteropus alecto pal-mir-493 precursor miRNA

Sequence

UUGUACAUGGUAGGCUUUCAUUcauucguuugcacauucggUGAAGGUCUACUGUGUGCCAGGC
..((((((((((((((((((((.................)))))))))))))))))))).....

Structure

---UU                    cauucgu 
     GUACAUGGUAGGCUUUCAUU       u
     ||||||||||||||||||||       u
     CGUGUGUCAUCUGGAAGUgg       g
CGGAC                    cuuacac 

Annotation confidence Not enough data

Genome context

KB031153.1: 21940683-21940746 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-493

Mature pal-miR-493-5p

• Accession: MIMAT0039943
• Description: Pteropus alecto pal-miR-493-5p mature miRNA
• Sequence: 1 - UUGUACAUGGUAGGCUUUCAUU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-493-3p

• Accession: MIMAT0039944
• Description: Pteropus alecto pal-miR-493-3p mature miRNA
• Sequence: 42 - UGAAGGUCUACUGUGUGCCAGGC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682