Stem-loop pal-mir-1185

Accession

MI0032428

Description

Pteropus alecto pal-mir-1185 precursor miRNA

Sequence

AGAGGAUACCCUUUGUAUGUUcacuuuauuaauggcgaAUAUACAGGGGGAGACUCUUAU
((((..(.((((((((((((((.((........)).)))))))))))))))..))))...

Structure

---    GA A              a  uua 
   AGAG  U CCCUUUGUAUGUUc cu   u
   ||||  | |||||||||||||| ||    
   UCUC  A GGGGGACAUAUAag gg   u
UAU    AG -              c  uaa 

Annotation confidence Not enough data

Genome context

KB031153.1: 22086787-22086846 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from pal-mir-1185

Mature pal-miR-1185-5p

• Accession: MIMAT0039973
• Description: Pteropus alecto pal-miR-1185-5p mature miRNA
• Sequence: 1 - AGAGGAUACCCUUUGUAUGUU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1185-3p

• Accession: MIMAT0039974
• Description: Pteropus alecto pal-miR-1185-3p mature miRNA
• Sequence: 39 - AUAUACAGGGGGAGACUCUUAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682