Stem-loop pal-mir-212

Accession

MI0032431

Description

Pteropus alecto pal-mir-212 precursor miRNA

Sequence

ACCUUGGCUCUAGACUGCUUACUgcccgggccgcccucagUAACAGUCUCCAGUCACGGCCA
.((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...

Structure

--A  U     CU      C      ccc   c 
   CC UGGCU  AGACUG UUACUg   ggg  
   || |||||  |||||| ||||||   ||| c
   GG ACUGA  UCUGAC AAUgac   ccc  
ACC  C     CC      -      --u   g 

Annotation confidence Not enough data

Genome context

KB031150.1: 22548322-22548383 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-212

Mature pal-miR-212-5p

• Accession: MIMAT0039979
• Description: Pteropus alecto pal-miR-212-5p mature miRNA
• Sequence: 1 - ACCUUGGCUCUAGACUGCUUACU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-212-3p

• Accession: MIMAT0039980
• Description: Pteropus alecto pal-miR-212-3p mature miRNA
• Sequence: 41 - UAACAGUCUCCAGUCACGGCCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682