Stem-loop pal-mir-345

Accession

MI0032432

Description

Pteropus alecto pal-mir-345 precursor miRNA

Sequence

GCUGACUCCUAGUCCAGUGCUCGugaaggcugcugggCCCUGAACUAGGGGUCUGGAGA
...((((((((((.(((.(((((((.....))).)))).))).))))))))))......

Structure

---GCU          C   U    -   a 
      GACUCCUAGU CAG GCUC Gug a
      |||||||||| ||| |||| ||| g
      CUGGGGAUCA GUC Cggg cgu g
AGAGGU          A   C    u   c 

Annotation confidence Not enough data

Genome context

KB031153.1: 21493102-21493160 [+]

Mature pal-miR-345-5p

• Accession: MIMAT0039981
• Description: Pteropus alecto pal-miR-345-5p mature miRNA
• Sequence: 1 - GCUGACUCCUAGUCCAGUGCUCG - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-345-3p

• Accession: MIMAT0039982
• Description: Pteropus alecto pal-miR-345-3p mature miRNA
• Sequence: 38 - CCCUGAACUAGGGGUCUGGAGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682