Stem-loop pal-mir-425

Accession

MI0032433

Description

Pteropus alecto pal-mir-425 precursor miRNA

Sequence

AAUGACACGAUCACUCCCGUUGAgugggcacccaagaagcCAUCGGGAAUGUCGUGUCCGCC
...(((((((.((.(((((....((((............))))))))).)))))))))....

Structure

-AAU       U  C     UUGA    gcacc 
    GACACGA CA UCCCG    gugg     c
    ||||||| || |||||    ||||      
    CUGUGCU GU AGGGC    UACc     a
CCGC       -  A     ----    gaaga 

Annotation confidence Not enough data

Genome context

KB030552.1: 482905-482966 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-425

Mature pal-miR-425-5p

• Accession: MIMAT0039983
• Description: Pteropus alecto pal-miR-425-5p mature miRNA
• Sequence: 1 - AAUGACACGAUCACUCCCGUUGA - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-425-3p

• Accession: MIMAT0039984
• Description: Pteropus alecto pal-miR-425-3p mature miRNA
• Sequence: 41 - CAUCGGGAAUGUCGUGUCCGCC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682