Stem-loop pal-mir-660

Accession

MI0032440

Description

Pteropus alecto pal-mir-660 precursor miRNA

Sequence

UACCCAUUGCAUAUCGGAGUUGugaauucucaaagcACCUCCUGUGUGCAUGGAUU
...((((.((((((.((((.(((...........))).)))).))))))))))...

Structure

UAC    U      C    U   gaau 
   CCAU GCAUAU GGAG UGu    u
   |||| |||||| |||| |||    c
   GGUA CGUGUG CCUC Acg    u
UUA    -      U    C   aaac 

Annotation confidence Not enough data

Genome context

KB030674.1: 319702-319757 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from pal-mir-660

Mature pal-miR-660-5p

• Accession: MIMAT0039997
• Description: Pteropus alecto pal-miR-660-5p mature miRNA
• Sequence: 1 - UACCCAUUGCAUAUCGGAGUUG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-660-3p

• Accession: MIMAT0039998
• Description: Pteropus alecto pal-miR-660-3p mature miRNA
• Sequence: 37 - ACCUCCUGUGUGCAUGGAUU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682