Stem-loop pal-mir-34a

Accession

MI0032461

Description

Pteropus alecto pal-mir-34a precursor miRNA

Literature search

1 open access papers mention pal-mir-34a
(1 sentences)

Sequence

UGGCAGUGUCUUAGCUGGUUGUugugagcaauggugaaggaagCAAUCAGCAAGUAUACUGCCCUAG
.(((((((((((.((((((((((.....((....)).....))))))))))))).))))))))....

Structure

---U        -   A          gugag  a 
    GGCAGUGU CUU GCUGGUUGUu     ca u
    |||||||| ||| ||||||||||     ||  
    CCGUCAUA GAA CGACUAACga     gu g
GAUC        U   -          aggaa  g 

Annotation confidence Not enough data

Genome context

KB030727.1: 6598143-6598209 [+]

Mature pal-miR-34a-5p

• Accession: MIMAT0040037
• Description: Pteropus alecto pal-miR-34a-5p mature miRNA
• Sequence: 1 - UGGCAGUGUCUUAGCUGGUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-34a-3p

• Accession: MIMAT0040038
• Description: Pteropus alecto pal-miR-34a-3p mature miRNA
• Sequence: 44 - CAAUCAGCAAGUAUACUGCCCUAG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682