Stem-loop pal-mir-652

Accession

MI0032463

Description

Pteropus alecto pal-mir-652 precursor miRNA

Sequence

CAACCCUAGGAAUGUGUGCCAUUcacauagacuaaaauugAAUGGCGCCACUAGGGUUGUGC
(((((((((...((.((((((((((.............)))))))))))))))))))))...

Structure

---         GAA  U          cauag 
   CAACCCUAG   UG GUGCCAUUca     a
   |||||||||   || ||||||||||     c
   GUUGGGAUC   AC CGCGGUAAgu     u
CGU         ---  -          uaaaa 

Annotation confidence Not enough data

Genome context

KB030941.1: 144741-144802 [+]

Mature pal-miR-652-5p

• Accession: MIMAT0040041
• Description: Pteropus alecto pal-miR-652-5p mature miRNA
• Sequence: 1 - CAACCCUAGGAAUGUGUGCCAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-652-3p

• Accession: MIMAT0040042
• Description: Pteropus alecto pal-miR-652-3p mature miRNA
• Sequence: 41 - AAUGGCGCCACUAGGGUUGUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682